I've seen this before on Birds $20s and all Journey notes except for the 2002 $5s.
The colour seems to be more of a yellow or orange though, and is often quite faint. Only a good UV light will pick it up.
I do not know what this square is for. It could be a security feature, or possibly some sort of identifier that enables or makes machine processing more efficient. You could try asking the Bank of Canada, but if it is a security feature of any sort, I doubt they'll say a word on it.
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